First, FSDT Honolulu never had any static jetways, they are all animated jetways, using the standard CTRL+J method, so they are referenced by the scenery AFCAD, with their actual models in a separate library .BGL, which I guess this is what you disabled.
When we'll release our own configuration, the Live Update will do everything which will be required to do to fix the scenery, including restoring files you might have removed (if they are still required), or removing files that are no longer required.
The only thing you'll have to do, would be remove your own customization .INI file, because we never remove automatically things you made personally in the GSX preferences folder, but they always get the highest priority in use, so you must remove them manually.
